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maranasgroup

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  1. Optimization_Methods_in_Metabolic_Networks Optimization_Methods_in_Metabolic_Networks Public

    Examples for Optimization Methods in Metabolic Networks (ISBN: 978-1-119-02849-9)

    GAMS 7 2

  2. SteadyCom SteadyCom Public

    Computing the maximum growth rate of a microbial community at community steady-state

    MATLAB 4 1

  3. PoreDesigner PoreDesigner Public

    Python 2 3

  4. SteadyState-MFA SteadyState-MFA Public

    Genome scale steady state 13C metabolic flux analysis

    MATLAB 2 4

  5. Nonstationary-MFA Nonstationary-MFA Public

    Genome-scale nonstationary 13C metabolic flux analysis

    MATLAB 1 1

  6. K-FIT K-FIT Public

    MATLAB 1 2

Repositories

Showing 10 of 42 repositories
  • KETCHUP Public

    Kinetic Estimation Tool Capturing Heterogeneous Datasets Using Pyomo (KETCHUP)

    maranasgroup/KETCHUP’s past year of commit activity
    Python 1 0 0 0 Updated Jun 28, 2024
  • chemo-enz Public

    Expanding chemical synthesis planning to explore chemo-enzymatic pathways using minimal transitions

    maranasgroup/chemo-enz’s past year of commit activity
    Python 0 0 0 0 Updated May 14, 2024
  • optstoic-gams Public

    optStoic-minFlux/minRxn code for PMID: 26530953

    maranasgroup/optstoic-gams’s past year of commit activity
    GAMS 0 Apache-2.0 2 0 0 Updated Apr 25, 2024
  • CatPred Public

    Machine Learning models for in vitro enzyme kinetic parameter prediction

    maranasgroup/CatPred’s past year of commit activity
    Python 13 0 1 0 Updated Apr 12, 2024
  • CatPred-DB Public
    maranasgroup/CatPred-DB’s past year of commit activity
    Python 0 MIT 0 1 0 Updated Apr 11, 2024
  • novoStoic2.0 Public

    novoStoic2.0: Integrated Pathway Design Tool with Thermodynamic Considerations and Enzyme Selection

    maranasgroup/novoStoic2.0’s past year of commit activity
    Python 5 5 0 0 Updated Apr 9, 2024
  • iSace_GSM Public

    Repository of a genome-scale metabolic model for Saccharomyces cerevisiae

    maranasgroup/iSace_GSM’s past year of commit activity
    Jupyter Notebook 0 1 0 0 Updated Mar 11, 2024
  • yeastsMFA Public

    Repository for yeasts MFA related files

    maranasgroup/yeastsMFA’s past year of commit activity
    MATLAB 0 1 0 0 Updated Mar 11, 2024
  • iPotri3463 Public

    This repository contains multi-tissue metabolic models of populus trichocarpa

    maranasgroup/iPotri3463’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Feb 15, 2024
  • dGPredictor Public
    maranasgroup/dGPredictor’s past year of commit activity
    Jupyter Notebook 8 2 1 1 Updated Dec 15, 2023
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