#!/usr/bin/env bash

# DAS Tool for genome-resolved metagenomics

# by Christian MK Sieber (cmksieber@gmail.com)

#

#

# DAS Tool Copyright (c) 2017, The Regents of the University of California, through Lawrence

# Berkeley National Laboratory (subject to receipt of any required approvals from the U.S.

# Dept. of Energy). All rights reserved.

#

# If you have questions about your rights to use or distribute this software, please contact

# Berkeley Lab's Innovation and Partnerships department at IPO@lbl.gov referring to

# "DAS Tool (2017-024)".

#

# NOTICE. This software was developed under funding from the U.S. Department of Energy. As

# such, the U.S. Government has been granted for itself and others acting on its behalf a

# paid-up, nonexclusive, irrevocable, worldwide license in the Software to reproduce,

# prepare derivative works, and perform publicly and display publicly. The U.S. Government

# is granted for itself and others acting on its behalf a paid-up, nonexclusive,

# irrevocable, worldwide license in the Software to reproduce, prepare derivative works,

# distribute copies to the public, perform publicly and display publicly, and to permit

# others to do so.

#

SOURCE="${BASH_SOURCE[0]}"

while [ -h "$SOURCE" ]; do

DIR="$( cd -P "$( dirname "$SOURCE" )" && pwd )"

SOURCE="$(readlink "$SOURCE")"

[[ $SOURCE != /* ]] && SOURCE="$DIR/$SOURCE"

done

DIR="$( cd -P "$( dirname "$SOURCE" )" && pwd )"

Rscript --vanilla ${DIR}/src/DAS_Tool.R $@