# Doxyfile 1.4.7

#---------------------------------------------------------------------------

# Project related configuration options

#---------------------------------------------------------------------------

PROJECT_NAME = mlpack

PROJECT_NUMBER = 3.1.1

OUTPUT_DIRECTORY = ./doc

CREATE_SUBDIRS = NO

OUTPUT_LANGUAGE = English

USE_WINDOWS_ENCODING = NO

BRIEF_MEMBER_DESC = YES

REPEAT_BRIEF = YES

ABBREVIATE_BRIEF = "The $name class" \

"The $name widget" \

"The $name file" \

is \

provides \

specifies \

contains \

represents \

a \

an \

the

ALWAYS_DETAILED_SEC = YES

INLINE_INHERITED_MEMB = NO

FULL_PATH_NAMES = YES

STRIP_FROM_PATH = ./

STRIP_FROM_INC_PATH =

SHORT_NAMES = NO

JAVADOC_AUTOBRIEF = YES

MULTILINE_CPP_IS_BRIEF = NO

DETAILS_AT_TOP = YES

INHERIT_DOCS = YES

SEPARATE_MEMBER_PAGES = NO

TAB_SIZE = 2

ALIASES =

OPTIMIZE_OUTPUT_FOR_C = NO

OPTIMIZE_OUTPUT_JAVA = NO

BUILTIN_STL_SUPPORT = NO

DISTRIBUTE_GROUP_DOC = NO

SUBGROUPING = YES

#---------------------------------------------------------------------------

# Build related configuration options

#---------------------------------------------------------------------------

EXTRACT_ALL = YES

EXTRACT_PRIVATE = NO

EXTRACT_STATIC = YES

EXTRACT_LOCAL_CLASSES = NO

EXTRACT_LOCAL_METHODS = NO

HIDE_UNDOC_MEMBERS = NO

HIDE_UNDOC_CLASSES = NO

HIDE_FRIEND_COMPOUNDS = YES

HIDE_IN_BODY_DOCS = NO

INTERNAL_DOCS = YES

CASE_SENSE_NAMES = YES

HIDE_SCOPE_NAMES = YES

SHOW_INCLUDE_FILES = NO

INLINE_INFO = YES

SORT_MEMBER_DOCS = YES

SORT_BRIEF_DOCS = YES

SORT_BY_SCOPE_NAME = YES

SORT_MEMBERS_CTORS_1ST = YES

GENERATE_TODOLIST = NO

GENERATE_TESTLIST = NO

GENERATE_BUGLIST = YES

GENERATE_DEPRECATEDLIST= NO

ENABLED_SECTIONS =

MAX_INITIALIZER_LINES = 30

SHOW_USED_FILES = YES

SHOW_DIRECTORIES = YES

FILE_VERSION_FILTER =

#---------------------------------------------------------------------------

# configuration options related to warning and progress messages

#---------------------------------------------------------------------------

QUIET = NO

WARNINGS = YES

WARN_AS_ERROR = YES

WARN_IF_UNDOCUMENTED = YES

WARN_IF_DOC_ERROR = YES

WARN_NO_PARAMDOC = YES

WARN_FORMAT = "$file:$line: $text"

WARN_LOGFILE =

#---------------------------------------------------------------------------

# configuration options related to the input files

#---------------------------------------------------------------------------

INPUT = ./src/mlpack \

./doc/guide \

./doc/tutorials \

./doc/policies

FILE_PATTERNS = *.hpp \

*.cpp \

*.txt

RECURSIVE = YES

EXCLUDE =

EXCLUDE_SYMLINKS = YES

EXCLUDE_PATTERNS = */build/* \

*/test/* \

*/arma_extend/* \

*/boost_backport/* \

*/.svn/* \

*_impl.cc \

*_impl.h \

*_impl.hpp \

*.cpp \

*.cc \

*_test.cc

EXAMPLE_PATH =

EXAMPLE_PATTERNS = *

EXAMPLE_RECURSIVE = NO

IMAGE_PATH =

INPUT_FILTER =

FILTER_PATTERNS =

FILTER_SOURCE_FILES = NO

#---------------------------------------------------------------------------

# configuration options related to source browsing

#---------------------------------------------------------------------------

SOURCE_BROWSER = YES

INLINE_SOURCES = NO

STRIP_CODE_COMMENTS = YES

REFERENCED_BY_RELATION = YES

REFERENCES_RELATION = YES

REFERENCES_LINK_SOURCE = YES

USE_HTAGS = NO

VERBATIM_HEADERS = YES

#---------------------------------------------------------------------------

# configuration options related to the alphabetical class index

#---------------------------------------------------------------------------

ALPHABETICAL_INDEX = YES

COLS_IN_ALPHA_INDEX = 1

IGNORE_PREFIX =

#---------------------------------------------------------------------------

# configuration options related to the HTML output

#---------------------------------------------------------------------------

GENERATE_HTML = YES

HTML_OUTPUT = html

HTML_FILE_EXTENSION = .html

HTML_HEADER =

HTML_FOOTER = ./doc/doxygen/footer.html

HTML_STYLESHEET =

HTML_EXTRA_STYLESHEET = ./doc/doxygen/extra-stylesheet.css

HTML_ALIGN_MEMBERS = YES

GENERATE_HTMLHELP = NO

CHM_FILE =

HHC_LOCATION =

GENERATE_CHI = NO

BINARY_TOC = NO

TOC_EXPAND = NO

DISABLE_INDEX = NO

ENUM_VALUES_PER_LINE = 1

GENERATE_TREEVIEW = NO

TREEVIEW_WIDTH = 250

USE_MATHJAX = NO

MATHJAX_FORMAT = SVG

MATHJAX_EXTENSIONS = TeX/AMSmath TeX/AMSsymbols

#---------------------------------------------------------------------------

# configuration options related to the LaTeX output

#---------------------------------------------------------------------------

GENERATE_LATEX = YES

LATEX_OUTPUT = latex

LATEX_CMD_NAME = latex

MAKEINDEX_CMD_NAME = makeindex

COMPACT_LATEX = NO

PAPER_TYPE = letter

EXTRA_PACKAGES = amsmath amssymb mathrsfs

LATEX_HEADER =

PDF_HYPERLINKS = NO

USE_PDFLATEX = NO

LATEX_BATCHMODE = NO

LATEX_HIDE_INDICES = NO

FORMULA_FONTSIZE = 50

#---------------------------------------------------------------------------

# configuration options related to the RTF output

#---------------------------------------------------------------------------

GENERATE_RTF = NO

RTF_OUTPUT = rtf

COMPACT_RTF = NO

RTF_HYPERLINKS = NO

RTF_STYLESHEET_FILE =

RTF_EXTENSIONS_FILE =

#---------------------------------------------------------------------------

# configuration options related to the man page output

#---------------------------------------------------------------------------

GENERATE_MAN = YES

MAN_OUTPUT = man

MAN_EXTENSION = .3

MAN_LINKS = NO

#---------------------------------------------------------------------------

# configuration options related to the XML output

#---------------------------------------------------------------------------

GENERATE_XML = NO

XML_OUTPUT = xml

XML_SCHEMA =

XML_DTD =

XML_PROGRAMLISTING = YES

#---------------------------------------------------------------------------

# configuration options for the AutoGen Definitions output

#---------------------------------------------------------------------------

GENERATE_AUTOGEN_DEF = NO

#---------------------------------------------------------------------------

# configuration options related to the Perl module output

#---------------------------------------------------------------------------

GENERATE_PERLMOD = NO

PERLMOD_LATEX = NO

PERLMOD_PRETTY = YES

PERLMOD_MAKEVAR_PREFIX =

#---------------------------------------------------------------------------

# Configuration options related to the preprocessor

#---------------------------------------------------------------------------

ENABLE_PREPROCESSING = YES

MACRO_EXPANSION = YES

EXPAND_ONLY_PREDEF = NO

SEARCH_INCLUDES = YES

INCLUDE_PATH =

INCLUDE_FILE_PATTERNS =

PREDEFINED =

EXPAND_AS_DEFINED =

SKIP_FUNCTION_MACROS = YES

#---------------------------------------------------------------------------

# Configuration::additions related to external references

#---------------------------------------------------------------------------

TAGFILES =

GENERATE_TAGFILE =

ALLEXTERNALS = NO

EXTERNAL_GROUPS = YES

PERL_PATH = /usr/bin/perl

#---------------------------------------------------------------------------

# Configuration options related to the dot tool

#---------------------------------------------------------------------------

CLASS_DIAGRAMS = YES

HIDE_UNDOC_RELATIONS = YES

HAVE_DOT = YES

CLASS_GRAPH = YES

COLLABORATION_GRAPH = NO

GROUP_GRAPHS = YES

UML_LOOK = NO

TEMPLATE_RELATIONS = YES

INCLUDE_GRAPH = YES

INCLUDED_BY_GRAPH = YES

CALL_GRAPH = NO

CALLER_GRAPH = NO

GRAPHICAL_HIERARCHY = YES

DIRECTORY_GRAPH = YES

DOT_IMAGE_FORMAT = png

# Hack dark color support in through the dot path. Kind of cheating...

DOT_PATH = dot -Gbgcolor=black

DOTFILE_DIRS =

MAX_DOT_GRAPH_WIDTH = 800

MAX_DOT_GRAPH_HEIGHT = 600

MAX_DOT_GRAPH_DEPTH = 1000

DOT_TRANSPARENT = NO

DOT_MULTI_TARGETS = NO

GENERATE_LEGEND = YES

DOT_CLEANUP = YES

#---------------------------------------------------------------------------

# Configuration::additions related to the search engine

#---------------------------------------------------------------------------

SEARCHENGINE = YES