From eb347bbfd96a191776fdced668b2dc8d72b2d525 Mon Sep 17 00:00:00 2001 From: belyaeva Date: Thu, 15 Dec 2022 14:27:46 -0800 Subject: [PATCH] Fix remaining version numbers for the release. PiperOrigin-RevId: 495697405 --- docs/runtime_metrics.md | 2 +- .../Inspecting_DeepConsensus_examples_and_running_model.ipynb | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/docs/runtime_metrics.md b/docs/runtime_metrics.md index 7959096..876825d 100644 --- a/docs/runtime_metrics.md +++ b/docs/runtime_metrics.md @@ -100,4 +100,4 @@ gcloud compute instances create "${USER}-gpu" \ The 10k ZMW test dataset is available on Google Storage: -`gs://brain-genomics-public/research/deepconsensus/quickstart/v0.3/n10000.subreads.bam` +`gs://brain-genomics-public/research/deepconsensus/quickstart/v1.1/n10000.subreads.bam` diff --git a/notebooks/Inspecting_DeepConsensus_examples_and_running_model.ipynb b/notebooks/Inspecting_DeepConsensus_examples_and_running_model.ipynb index 96aa93e..64bd5cc 100644 --- a/notebooks/Inspecting_DeepConsensus_examples_and_running_model.ipynb +++ b/notebooks/Inspecting_DeepConsensus_examples_and_running_model.ipynb @@ -604,7 +604,7 @@ "source": [ "### Let's break that down\n", "\n", - "Each matrix is composed of multiple data types layered in rows. The bases, pulse-width, inter-pulse duration, and strand are per-subread, up to the max number of subreads (this is in params.max_passes, which as of DeepConsensus v0.3 is 20). The input also contains a draft circular consensus sequence (CCS) from PacBio and the signal-to-noise ratio (SN)." + "Each matrix is composed of multiple data types layered in rows. The bases, pulse-width, inter-pulse duration, and strand are per-subread, up to the max number of subreads (this is in params.max_passes, which as of DeepConsensus v1.1 is 20). The input also contains a draft circular consensus sequence (CCS) from PacBio and the signal-to-noise ratio (SN)." ] }, {