We can consider this solved after #67

Almost. Can you merge master into brush_integration? (Not the other way around, at least not yet.) There are probably two elements that need to be added to the top of the code output from codetrack.R:

• se <- XXX where XXX is the variable name for the input object; see Slack discussions.
• all.coordinates <- list() to enable storage of brushed points.

I did not catch up with the brushing part, but I'll look into it.
Merged the newest version to track code also here in brush_integration

I can still add se <- XXX before merging to master. Not sure what you mean about all.coordinates though

You'll notice in iSEE.R that every transmitting plot (i.e., with .brushActive field being TRUE) adds a command to store the plot coordinates into all.coordinates. This ensures that a separate receiving plot can properly determine the points that were brushed in the transmitting plot. Obviously, this also means that we need to define all.coordinates at the start of the code output by code_track.R.

Indeed. Not sure how to best do this, so I'll leave it for tomorrow or one of you.

Note to self (and users):
I was going to ask whether the tracker could include a button 'copy to clipboard' , out of laziness to drag my mouse over all the script.
However, I just noticed that one can click inside the aceEditor and then hit Cmd-A to select everything.

Fixed with fbff388, closing.