optional column with user-friendly gene_name #33
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A much simpler solution would be for people to change the row names prior to calling |
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I just want to avoid falling in the Seurat choice of |
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If it's a big deal, I would use the approach in section 2.3 here (I'll move it to scater). The fact remains that somewhere along the line, if the gene names are not unique, there needs to be a way to disambiguate them. Hiding the ambiguities would probably be even worse for data exploration. Moreover, if people want a nicer plot annotation, they can do that outside the app once they have the code from @federicomarini's log. It shouldn't be a particularly complex change. |
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Closing this, |
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while unique gene ids (e.g. ensemble_gene_id) are necessary to fetch data from the object, it would be nice to let users select an optional column of the Gene statistics table that contains a user-friendly gene symbol to annotate the plot (e.g.
ggplot(...) + labs(subtitle = ...)).The widget to select this would be in an expandable "plotting parameters" panel under the Gene statistics table.
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