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@igsr

The International Sample Genome Resource (IGSR)

This organisation supports the codebase for the IGSR which is providing on going support for the 1000 Genomes project

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  1. 1000Genomes_data_indexes 1000Genomes_data_indexes Public

    The index files for sequence and other data created for the 1000 Genomes project and the International Genome Sample Resource

    40 12

  2. igsr_analysis igsr_analysis Public

    This repo contains code that is relevant for the analysis (Mapping, BAM qc, Variant Calling, Filtering etc...) of IGSR data

    Jupyter Notebook 4 5

  3. gca_1000genomes_website gca_1000genomes_website Public

    The 1000genomes website

    TypeScript 2 10

  4. igsr-code igsr-code Public

    This code is to support the day to day running of IGSR supporting the 1000 Genomes data

    Perl 1 1

  5. igsr_archive igsr_archive Public

    Contains code to perform several operations involving files in the IGSR (1000 genomes) FTP archive

    Python 1 3

  6. igsr.github.io igsr.github.io Public

    The Static website content for the International Genome Sample Resource

    HTML

Repositories

Showing 10 of 10 repositories
  • gca_1000genomes_website Public

    The 1000genomes website

    igsr/gca_1000genomes_website’s past year of commit activity
    TypeScript 2 10 0 6 Updated Jun 25, 2024
  • igsr_archive Public

    Contains code to perform several operations involving files in the IGSR (1000 genomes) FTP archive

    igsr/igsr_archive’s past year of commit activity
    Python 1 Apache-2.0 3 0 3 Updated Apr 15, 2024
  • gca_elasticsearch_tools Public Forked from igsr/gca_elasticsearch

    Tools for elasticsearch

    igsr/gca_elasticsearch_tools’s past year of commit activity
    Perl 0 Apache-2.0 6 0 0 Updated Apr 2, 2024
  • gca_elasticsearch Public Forked from EMBL-EBI-GCA/gca_elasticsearch

    Tools for elasticsearch

    igsr/gca_elasticsearch’s past year of commit activity
    Perl 0 Apache-2.0 6 0 1 Updated Jan 18, 2023
  • igsr_analysis Public

    This repo contains code that is relevant for the analysis (Mapping, BAM qc, Variant Calling, Filtering etc...) of IGSR data

    igsr/igsr_analysis’s past year of commit activity
    Jupyter Notebook 4 Apache-2.0 5 2 10 Updated Dec 8, 2022
  • igsr-code Public

    This code is to support the day to day running of IGSR supporting the 1000 Genomes data

    igsr/igsr-code’s past year of commit activity
    Perl 1 Apache-2.0 1 0 0 Updated Nov 9, 2021
  • gca_website_updater Public Forked from EMBL-EBI-GCA/gca_website_updater

    Web server for pulling from github and updating our static content websites

    igsr/gca_website_updater’s past year of commit activity
    Perl 0 Apache-2.0 2 0 0 Updated Feb 24, 2021
  • 1000Genomes_data_indexes Public

    The index files for sequence and other data created for the 1000 Genomes project and the International Genome Sample Resource

    igsr/1000Genomes_data_indexes’s past year of commit activity
    40 Apache-2.0 12 0 1 Updated Jul 15, 2019
  • gtex-pipeline Public Forked from broadinstitute/gtex-pipeline

    GTEx & TOPMed data production and analysis pipelines

    igsr/gtex-pipeline’s past year of commit activity
    Python 0 BSD-3-Clause 178 0 0 Updated Feb 28, 2019
  • igsr.github.io Public

    The Static website content for the International Genome Sample Resource

    igsr/igsr.github.io’s past year of commit activity
    HTML 0 Apache-2.0 0 0 0 Updated Sep 30, 2015

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