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Pull requests: lgatto/MSnbase

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Pull requests list

fix legend in .chromatogram for y=="bpi"
#14 by sgibb was merged Feb 20, 2014 Loading… updated Feb 21, 2014
add hints to corresponding xcms functions
#16 by sgibb was merged Feb 21, 2014 Loading… updated Feb 21, 2014
3
Update imputation.R
#17 by samWieczorek was merged Feb 27, 2014 Loading… updated Feb 27, 2014
.gitignore
#19 by sgibb was merged Mar 21, 2014 Loading… updated Mar 22, 2014
add pRoloc to Suggests
#20 by sgibb was closed Mar 23, 2014 Loading… updated Mar 23, 2014
1
circumvent finalize error
#21 by sgibb was merged Mar 23, 2014 Loading… updated Mar 23, 2014
add addIdentificationData,{MSnExp,MSnSet}-method
#22 by sgibb was merged Mar 23, 2014 Loading… updated Mar 23, 2014
increase mzID version number
#23 by sgibb was merged Mar 24, 2014 Loading… updated Mar 24, 2014
fix removeNoId
#25 by sgibb was merged Mar 24, 2014 Loading… updated Mar 24, 2014
add idSummary
#24 by sgibb was merged Mar 24, 2014 Loading… updated Mar 24, 2014
add SIp and NSAF
#27 by sgibb was merged Mar 25, 2014 Loading… updated Mar 25, 2014
1
add sep argument to utils.vec2ssv and Co
#29 by sgibb was closed Apr 6, 2014 Loading… updated Apr 6, 2014
2
add precursor normalization method for MS2 spectra
#30 by sgibb was merged Apr 8, 2014 Loading… updated Apr 8, 2014
compareSpectra
#32 by sgibb was merged Apr 15, 2014 Loading… updated Apr 15, 2014
2
start vignette entries for calculateFragments and compareSpectra
#34 by sgibb was merged Apr 29, 2014 Loading… updated Apr 29, 2014
adding redundancy handling to combineFeatures
#18 by vladpetyuk was merged Mar 14, 2014 Loading… updated Jul 9, 2014
fix typo in MSnbase-demo vignette
#15 by sgibb was merged Feb 20, 2014 Loading… updated Jul 12, 2014
R CMD check warning: "no visible global function definition"
#40 by sgibb was merged Nov 2, 2014 Loading… updated Nov 2, 2014
fix mzIdentML import for MGF based identification files; see issue #42
#45 by sgibb was merged Feb 1, 2015 Loading… updated Feb 2, 2015
12
partly rewrite readMgfData
#44 by sgibb was merged Jan 19, 2015 Loading… updated Feb 19, 2015
fix of combine features bug
#50 by vladpetyuk was merged Apr 14, 2015 Loading… updated Apr 14, 2015
1
Added description in iPQF header
#58 by martifis was merged Jun 25, 2015 Loading… updated Jun 25, 2015
1
partly rewrite writeMgfData
#61 by sgibb was merged Jul 15, 2015 Loading… updated Jul 15, 2015
use lapply in subsetBy
#63 by sgibb was merged Sep 23, 2015 Loading… updated Sep 24, 2015
1
new default parameter 'feature weight' in iPQF
#65 by martifis was merged Oct 7, 2015 Loading… updated Oct 7, 2015
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