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Issues list

MAPQ should be 0 question
#9 opened Jul 29, 2014 by apelin20
@lindenb
1
ability to copy particular fields in vcfviewgui
#21 opened Feb 19, 2015 by rjsicko
@lindenb
biostar94573 and multiple sequence alignments
#40 opened Dec 18, 2015 by ntchuang
4
Can it take input with only 2 sequecnes?
#41 opened Dec 22, 2015 by mbk0asis
error overlapping PCR intervals - pcrclipreads enhancement
#44 opened Feb 25, 2016 by avilella
@lindenb
4
multipass PcrClipReads
#46 opened Feb 29, 2016 by avilella
2
PcrClipReads: reads with already soft clipped bases
#70 opened Dec 15, 2016 by alborm
SAM4WebLogo bug? Some output sequence lengths are short by 1 character
#77 opened May 15, 2017 by ashipde
1
Wrong results when original reads contains soft clipped nucleotides bug
#81 opened Jun 29, 2017 by chadisaad
10
bamstats04 changed default behaviour.... somehow
#88 opened Nov 5, 2017 by apelin20
2
Is it possible to run fixvcfmissinggenotypes in parallel?
#97 opened Mar 1, 2018 by durwa004
3
Feature request: Marking indel size in lowresbam2raster enhancement
#100 opened Mar 15, 2018 by wdecoster
errors running sortsamerefname, biostar154220
#103 opened May 23, 2018 by PAMorin
2
class not found
#116 opened Nov 13, 2018 by bgphd
8
reference
#119 opened Feb 8, 2019 by jinyoungkoh
2
samjdk information
#124 opened Apr 5, 2019 by orspa
5
deletion without obvious coverage drop in the depth panel
#131 opened Jul 1, 2019 by shannjiang
Can I use biostar160470.jar with a psi-tBLASTn checkpint file as query?
#135 opened Sep 30, 2019 by cosmiccapybara
2
install error ?
#138 opened Dec 6, 2019 by hmyh1202
3
ERROR IN VCF HEADER
#141 opened Dec 27, 2019 by AqsaMajeed-star
1
[INFO][Launcher]bim2vcf Exited with failure (-1)
#144 opened Jan 15, 2020 by vicruiser
8
[SEVERE][CoverageServer]Cannot figure out type of file file:///home/silviav/jvarkit/fasta from extension
#149 opened Feb 14, 2020 by Caro-Ca
12
Not working with VCFs that have multiple chromosomes.
#155 opened Mar 18, 2020 by bambrozio
7
Biostar398854 does not work
#158 opened Jun 3, 2020 by AlBaarS
1
include sam2tsv as a third party software
#163 opened Aug 25, 2020 by Huanle
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