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Annotation missing in set_difference_unique_set_one/two_statistics.csv files #137

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dutchscientist opened this issue Jun 1, 2015 · 3 comments
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Annotation missing in set_difference_unique_set_one/two_statistics.csv files #137

dutchscientist opened this issue Jun 1, 2015 · 3 comments
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@dutchscientist
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The files generated by the "query_pan_genome -a difference --input_set_one 1.gff,2.gff --input_set_two 3.gff,4.gff,5.gff -g clustered_proteins" (set_difference_unique_set_one/two_statistics.csv) do not have the information in the annotation column, which the gene_presence_absence.csv does have. It would be helpful if they do, is that possible?
@dutchscientist
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I have sent the query_pan_genome output of the test dataset to the previous query to roary@sanger.ac.uk.

@andrewjpage
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I've fixed this issue in version 3.0.2 and the annotation column is now populated. Thanks for reporting it.

@dutchscientist
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Thanks, much appreciated. Will try it out soon :-)

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@andrewjpage @dutchscientist