[go: nahoru, domu]
Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Provide classification-type log when performing alignments with SortMeRNA against the full rRNA database #378

Open
ppericard opened this issue May 11, 2023 · 0 comments
Open

Provide classification-type log when performing alignments with SortMeRNA against the full rRNA database #378

ppericard opened this issue May 11, 2023 · 0 comments
Labels
enhancement
Milestone
v5.0.0

Comments

@ppericard
Copy link
Contributor
ppericard commented May 11, 2023 •
edited
Loading

As suggested in #300 , we could output some classification summary at the Kingdom level and rRNA type (SSU, LSU, ...) when performing alignments against the full rRNA database by using the reference sequences id and being careful to explain the limitation of this "classification".
This should not be provided when using multiple reference databases.
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
enhancement
Projects
None yet
Milestone
v5.0.0
Development

No branches or pull requests
1 participant
@ppericard