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Minkyung Baek committed Jul 7, 2021
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Expand Up @@ -47,9 +47,10 @@ wget https://bfd.mmseqs.com/bfd_metaclust_clu_complete_id30_c90_final_seq.sorted
mkdir -p bfd
tar xfz bfd_metaclust_clu_complete_id30_c90_final_seq.sorted_opt.tar.gz -C ./bfd
# structure templates [10G]
# structure templates (including *_a3m.ffdata, *_a3m.ffindex) [over 100G]
wget https://files.ipd.uw.edu/pub/RoseTTAFold/pdb100_2021Mar03.tar.gz
tar xfz pdb100_2021Mar03.tar.gz
# for CASP14 benchmarks, we used this one: https://files.ipd.uw.edu/pub/RoseTTAFold/pdb100_2020Mar11.tar.gz
```

6. Obtain a [PyRosetta licence](https://els2.comotion.uw.edu/product/pyrosetta) and install the package in the newly created `folding` conda environment ([link](http://www.pyrosetta.org/downloads)).
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