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@atlasxomics

AtlasXomics

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  1. AtlasXbrowser AtlasXbrowser Public

    Interactive browser for Atlas Data

    Python 2 2

  2. ATX_epigenomics ATX_epigenomics Public

    pipeline and scripts for the analysis of scATAC-seq data via DBIT-seq

    R 2

  3. AtlasWebService AtlasWebService Public

    A web service for automating metadata collection and bioinformatics analysis

    Python 1 2

  4. AtlasWorkers AtlasWorkers Public

    AtlasXomics Bioinformatics Computation Worker module

    Python 1 2

  5. downsample_latch downsample_latch Public

    Simple Latch wf for downsampling fasta/q files

    Python 1

  6. archr_latch archr_latch Public

    Latch.bio implementation of archr

    R 1

Repositories

Showing 10 of 27 repositories
  • archrproject_latch Public

    Latch.bio implementation of archr for creating ArchRProject for Spatial scATAC-seq via DBiT-seq

    atlasxomics/archrproject_latch’s past year of commit activity
    R 0 MIT 1 0 1 Updated Jun 28, 2024
  • atlasXomics_pipeline_wf Public
    atlasxomics/atlasXomics_pipeline_wf’s past year of commit activity
    Python 0 0 1 0 Updated Jun 28, 2024
  • ftp_downloader Public

    Simple Latch UI for downloading ftp-hosted data into Latch console.

    atlasxomics/ftp_downloader’s past year of commit activity
    Python 0 0 0 0 Updated Jun 12, 2024
  • AtlasXbrowser_docs Public
    atlasxomics/AtlasXbrowser_docs’s past year of commit activity
    0 0 0 0 Updated Jun 11, 2024
  • AtlasWorkers Public

    AtlasXomics Bioinformatics Computation Worker module

    atlasxomics/AtlasWorkers’s past year of commit activity
    Python 1 2 0 0 Updated Jun 6, 2024
  • ATX_impute Public

    Lane imputation workflow for LatchBio

    atlasxomics/ATX_impute’s past year of commit activity
    R 0 MIT 0 0 0 Updated Jun 5, 2024
  • archr_latch Public

    Latch.bio implementation of archr

    atlasxomics/archr_latch’s past year of commit activity
    R 1 0 3 0 Updated Jun 5, 2024
  • clean_latch Public

    Latch.bio workflow for remediating lane artifacts in spatial ATAC-seq experiments

    atlasxomics/clean_latch’s past year of commit activity
    Python 0 MIT 0 3 0 Updated Jun 4, 2024
  • neighborhood_wf Public
    atlasxomics/neighborhood_wf’s past year of commit activity
    R 0 MIT 0 0 0 Updated Jun 4, 2024
  • combined_cluster_wf Public
    atlasxomics/combined_cluster_wf’s past year of commit activity
    R 0 MIT 0 0 0 Updated Jun 3, 2024
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