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441 Open 1,227 Closed
441 Open 1,227 Closed
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Issues list

Installation from source instructions in README
#4140 opened Oct 21, 2022 by idoerg
4
BUG: Phylo.parse(file,"newick") does not throw error if name invalidly contains whitespace
#4134 opened Oct 15, 2022 by corneliusroemer
1
2
QCP and SVD Superimposer RMSD result should not depend on the order of the input coordinates
#4119 opened Oct 7, 2022 by gciaberi
2
DSSP on Biopython
#4116 opened Oct 4, 2022 by dongli96
@etal
Setup with MAC OS
#4093 opened Sep 27, 2022 by cmion1
1
PDBList() download in a parallelized for loop results in skipping some files
#4092 opened Sep 26, 2022 by uros-sipetic
3
Handling of multiple UIDs in Entrez ELink
#4087 opened Sep 22, 2022 by jlumpe
DSSP support for ENT extension, as well as GZ files
#4084 opened Sep 20, 2022 by uros-sipetic
1
SeqIO PDB Atom Iterator
#4080 opened Sep 10, 2022 by alex-hh
@etal
3
Calculate Radius of Gyration for a PDB File
#4077 opened Sep 8, 2022 by alirezaomidi
1
mmcif parser failed to catch resolution information
#4068 opened Sep 4, 2022 by lllovej
2
PDBIO.save() include SEQRES information?
#4064 opened Aug 30, 2022 by JSLJ23
4
SeqFeature cleanup
#4061 opened Aug 29, 2022 by mdehoon
2
SetuptoolsDeprecationWarning: Installing ... as data is deprecated, use packages
#4050 opened Aug 23, 2022 by peterjc
8
Weblogo returning a html page
#4039 opened Aug 17, 2022 by arupgsh
18
Bio.PDB.PSEA should use a temporary directory to run the third-party tool Enhancement good first issue This should be an easy fix, suitable for beginners help wanted
#4031 opened Aug 11, 2022 by JoaoRodrigues
1
5
Inconsistency in keeping square brackets from node comments from phylogenetic trees (Nexus VS Phylo)
#4009 opened Jul 29, 2022 by Gullumluvl
@etal
2
X.molecular_weight()
#4002 opened Jul 27, 2022 by pauljmclaughlin
10
Error in using Phylo.convert
#4001 opened Jul 27, 2022 by ARise-fox
@etal
6
Add third-party tools to CI Enhancement Testing
#4000 opened Jul 26, 2022 by JoaoRodrigues
1 task
Is it possible to access archived genome assemblies?
#3993 opened Jul 22, 2022 by TeodoraTockovska
3
PairwiseAligner behavior mismatch versus documentation for 1.79
#3991 opened Jul 19, 2022 by ressy
2
Access to Alphafold database of 3D modules in a PDBList-like interface Enhancement good first issue This should be an easy fix, suitable for beginners help wanted
#3990 opened Jul 18, 2022 by JoaoRodrigues
3
Update argument handling in PDBList.py, possibly by creating a new module. Enhancement good first issue This should be an easy fix, suitable for beginners help wanted
#3989 opened Jul 18, 2022 by JoaoRodrigues
2
Extend PDBList obsolete handling to mmCIF and mmtf formats as well as assemblies Bug Enhancement good first issue This should be an easy fix, suitable for beginners help wanted
#3988 opened Jul 18, 2022 by JoaoRodrigues
1
1
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