Reactome version update (#148)

* get release version of reactome * fixed spacing issue
biothings · Apr 18, 2024 · 03c90fa · 03c90fa
1 parent e8250f5
commit 03c90fa
Showing 1 changed file with 15 additions and 3 deletions.
diff --git a/src/hub/dataload/sources/reactome/dump.py b/src/hub/dataload/sources/reactome/dump.py
@@ -1,14 +1,20 @@
+import datetime
+import os
+import sys
+import time
 
+import biothings
+import requests
 
-import os, sys, time, datetime
+import config
 
-import biothings, config
 biothings.config_for_app(config)
 
-from config import DATA_ARCHIVE_ROOT
 from biothings.hub.dataload.dumper import LastModifiedHTTPDumper
 from biothings.utils.common import unzipall
 
+from config import DATA_ARCHIVE_ROOT
+
 
 class ReactomeDumper(LastModifiedHTTPDumper):
 
@@ -18,3 +24,9 @@ class ReactomeDumper(LastModifiedHTTPDumper):
     SRC_URLS = ["https://reactome.org/download/current/NCBI2Reactome_All_Levels.txt"]
     SCHEDULE = "0 6 * * *"
 
+    def set_release(self):
+        self.release = str(
+            requests.get(
+                "https://reactome.org/ContentService/data/database/version"
+            ).json()
+        )