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  1. sourmash-bio/sourmash_plugin_branchwater sourmash-bio/sourmash_plugin_branchwater Public

    fast, multithreaded sourmash operations: search, compare, and gather.

    Python 14 2

  2. sourmash-bio/sourmash sourmash-bio/sourmash Public

    Quickly search, compare, and analyze genomic and metagenomic data sets.

    Python 452 78

  3. dib-lab/genome-grist dib-lab/genome-grist Public

    map Illumina metagenomes to genomes!

    Jupyter Notebook 36 6

  4. dib-lab/charcoal dib-lab/charcoal Public

    Remove contaminated contigs from genomes using k-mers and taxonomies.

    Python 50 1

  5. dib-lab/2020-workflows-paper dib-lab/2020-workflows-paper Public

    Strategies for leveraging workflow systems to streamline large-scale biological analyses

    HTML 6 8

  6. sourmash-bio/sourmash_plugin_directsketch sourmash-bio/sourmash_plugin_directsketch Public

    Python 1 1