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Auckland University of Technology
- Auckland, New Zealand
- http://cykev.in
- @cyklee
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ref-guided-assembly-pipeline
ref-guided-assembly-pipeline PublicAdapting the pipeline described in Lischer & Schmizu (2017, doi:10.1186/s12859-017-1911-6) for my own use.
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fastq2biom
fastq2biom Public archiveZ shell script automating steps processing Illumina paired-end FASTQ to a BIOM format.
Shell
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Huntaxa
Huntaxa Public archiveSearch for specified taxa above a specified relative abundance among microbiome studies
Shell
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microbiome_helper
microbiome_helper PublicForked from LangilleLab/microbiome_helper
A repository of bioinformatic scripts, SOPs, and tutorials for analyzing microbiome data.
Python
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