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A terminal workspace with batteries included
This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.
A python tool for rapidly assessing the monophyly of user-defined groups in phylogenetic trees.
Code for rapidNJ by Martin Simonsen, Thomas Mailund and Christian N. S. Pedersen.
Colour palettes for data visualisation, inspired by the plumage of Australian birds
Software for painlessly estimating average nucleotide diversity within and between populations
Assessing confidence in introgression among four populations
Finds SNP sites from a multi-FASTA alignment file
Recovering genes from targeted sequence capture data
A massively parallel tool for model selection and tree inference on thousands of genes
List of Computer Science courses with video lectures.
RAxML Next Generation: faster, easier-to-use and more flexible
Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis