The break time reminder app

A very fast interval tree data structure

Vim-fork focused on extensibility and usability

A framework for managing and maintaining multi-language pre-commit hooks.

Accelerating new GitHub Actions workflows

A terminal workspace with batteries included

Structural variant caller for real-time long-read sequencing data

python plotly Circos from VCF

Snakemake-based computational workflow for neoantigen prediction from diverse sources

Splitting of sequence reads by internal adapter sequence search

🌙 LunarVim is an IDE layer for Neovim. Completely free and community driven.

🌺 Minimalist Vim Plugin Manager

Python packaging and dependency management made easy

pybox is a library including the useful feature

PxBLAT: An Efficient and Ergonomic Python Binding Library for BLAT

A mini project that shows whom doesn't follow you back on Github

Datasets, scripts, and anything useful for benchmarking SVs

lumpy: a general probabilistic framework for structural variant discovery

VarIant SimulatOR for short, long and linked reads

Combine structural variation outputs from long sequencing reads into a superior call set

A *fast* tool for BAM/CRAM quality evaluation, intended for long reads

ChatResearch is an indispensable tool that could be a lifesaver for graduate students.

🟩⬜ Generates a snake game from a github user contributions graph and output a screen capture as animated svg or gif

The AI-powered code editor

Toolkit for calling structural variants using short or long reads

This is the note for my study of python grammar

This repo includes ChatGPT prompt curation to use ChatGPT better.

A To-do list to manage my life