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daphnia_magna_metagenome
daphnia_magna_metagenome PublicAll scripts used for data analysis and visualization in "Characterization of core bacterial species in the Daphnia magna microbiota using shotgun metagenomics".
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circadian_microbiome
circadian_microbiome PublicThis project contains code for: Pfenning-Butterworth A.C, Cooper R.O., and Cressler C.E. Diel rhythm influences microbiota composition in two zooplankton species.
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daphnia_multigenerational_antibiotics
daphnia_multigenerational_antibiotics PublicMultiple generations of antibiotic exposure and isolation influence host fitness and the microbiome in a model zooplankton species. Cooper RO, Tjards S, Hotovy J, Nguyen DT, Cressler CE.
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