readme update with doi

suchanek · May 8, 2024 · d737a15 · d737a15
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diff --git a/README.md b/README.md
@@ -2,6 +2,7 @@
 [![PyPI version](https://badge.fury.io/py/proteusPy.svg)](https://badge.fury.io/py/proteusPy)
 ![Testing](https://github.com/suchanek/proteusPy/actions/workflows/pytest.yml/badge.svg)
 [![status](https://joss.theoj.org/papers/45de839b48a550d6ab955c5fbbc508f2/status.svg)](https://joss.theoj.org/papers/45de839b48a550d6ab955c5fbbc508f2)
+[![DOI](https://zenodo.org/badge/575657091.svg)](https://zenodo.org/doi/10.5281/zenodo.11148440)
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 # Summary

diff --git a/notebooks/Analysis_2q7q.ipynb b/notebooks/Analysis_2q7q.ipynb
@@ -193,15 +193,14 @@
    "cell_type": "markdown",
    "metadata": {},
    "source": [
-    "The two structures overlap with an overall RMS error of 2.14 A. Not bad considering the modeled structure is made using idealized bond lengths and angles. This serves to remind us that nature is the ultimate modeling engine, and that we still have much to learn."
+    "The two structures overlap with an overall RMS error of 2.14 A. Not bad considering the modeled structure is made using idealized bond lengths and angles!"
    ]
   },
   {
    "cell_type": "markdown",
    "metadata": {},
    "source": [
     "## References\n",
-    "* *Application of Artificial Intelligence in Protein Design* - Doctoral Dissertation, EG Suchanek, 1987, Johns Hopkins Medical School\n",
     "* https://doi.org/10.1021/bi00368a023\n"
    ]
   }