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Issues list

Prefix utility commands with roary- ? enhancement
#226 by tseemann was closed Apr 18, 2016 updated Apr 18, 2016
number_of_conserved_genes.Rtab error question
#245 by YangChaoCN was closed Apr 26, 2016 updated Apr 26, 2016
2
Is it possible to build a pan-genome tree using Roary question
#253 by raymondkiu was closed Jun 14, 2016 updated Jun 14, 2016
3
multi fasta file for each core gene question
#252 by rndg20 was closed Jun 14, 2016 updated Jun 14, 2016
1
Error: You need to provide at least 2 files to build a pan genome question
#251 by jinlizhang200706 was closed Jun 14, 2016 updated Jun 14, 2016
2
unique and new genes by Rtab files question
#255 by ceya was closed Jun 30, 2016 updated Jun 30, 2016
1
Multi fasta files (amino acid) for pan genome question
#254 by raymondkiu was closed Jun 30, 2016 updated Jun 30, 2016
1
GFF parsing doesn't match GFF3 specification bug
#249 by widdowquinn was closed Jul 20, 2016 updated Jul 20, 2016
roary R plots don't work on server --- lack of X11 bug
#194 by andersgs was closed Jul 25, 2016 updated Jul 25, 2016
2
Roary not using packaged executables installation
#215 by bachev was closed Jul 25, 2016 updated Jul 25, 2016
@andrewjpage
1
Prepackaged binaries are dynamically linked and not working on older distributions wontfix
#216 by bachev was closed Jul 25, 2016 updated Jul 25, 2016
3
Roary not generating pan_genome_reference.fa
#223 by swlong was closed Jul 25, 2016 updated Jul 25, 2016
4
create_pan_genome_plots.R - X11 font problem installation
#230 by miguelpmachado was closed Jul 25, 2016 updated Jul 25, 2016
3
empty accessory_binary_genes.fa file
#262 by gsong1205 was closed Jul 25, 2016 updated Jul 25, 2016
2
a guix package
#259 by wwood was closed Jul 25, 2016 updated Jul 26, 2016
8
Roary 3.6.5 giving different (erroneous) results compared to 3.5.7 and 3.6.1/3.6.3/3.6.4 bug
#263 by dutchscientist was closed Jul 25, 2016 updated Jul 26, 2016
12
Roary core alignment for Gubbins? question
#267 by maesaar was closed Jul 28, 2016 updated Jul 28, 2016
2
unexpected curve from number_of_conserved_genes.Rtab question
#268 by kmurase1213 was closed Aug 1, 2016 updated Aug 1, 2016
2
Getting Roary into Homebrew enhancement
#152 by tseemann was closed Aug 24, 2016 updated Aug 24, 2016
3
I have published a Roary homebrew formula enhancement
#208 by tseemann was closed Aug 24, 2016 updated Aug 24, 2016
3
Errors when downloaded sequences from NCBI
#274 by lindachuan123 was closed Aug 30, 2016 updated Aug 30, 2016
1
_clustered.clstr file does not exist, cannot be read installation
#250 by russellj7 was closed Aug 30, 2016 updated Sep 28, 2016
2
Is these results fine to use?
#282 by maesaar was closed Oct 3, 2016 updated Oct 3, 2016
5
The alignment file contains identical sequences of unknown origin question
#286 by nikolay12 was closed Nov 1, 2016 updated Nov 1, 2016
1
core genome alignment file question
#281 by ceya was closed Nov 1, 2016 updated Nov 1, 2016
1
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