Fix pandas regex warning

scverse · Apr 1, 2021 · 5a53dfd · 5a53dfd
1 parent aef5b91
commit 5a53dfd
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Showing 2 changed files with 3 additions and 3 deletions.
diff --git a/requirements.txt b/requirements.txt
@@ -3,7 +3,7 @@ dask>=2.30
 docrep>=0.3.1
 ipywidgets>=7.5.1  # progress bar
 omnipath>=1.0.4
-pandas>=1.1.4
+pandas>=1.2.0
 rasterio>=1.1.8
 scanpy[leiden]>=1.7.0
 scikit-image>=0.17.1

diff --git a/squidpy/gr/_ligrec.py b/squidpy/gr/_ligrec.py
@@ -609,8 +609,8 @@ def prepare(
                 columns={"genesymbol_intercell_source": SOURCE, "genesymbol_intercell_target": TARGET}, inplace=True
             )
 
-            interactions[SOURCE] = interactions[SOURCE].str.replace("^COMPLEX:", "")
-            interactions[TARGET] = interactions[TARGET].str.replace("^COMPLEX:", "")
+            interactions[SOURCE] = interactions[SOURCE].str.replace("^COMPLEX:", "", regex=True)
+            interactions[TARGET] = interactions[TARGET].str.replace("^COMPLEX:", "", regex=True)
 
         _ = super().prepare(interactions, complex_policy=complex_policy)
         return self