Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
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Updated
Mar 27, 2024
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
A language and runtime for distributed, incremental data processing in the cloud
Assertive programming for R analysis pipelines
Automatic detection of defected solar panel modules
Modules for processing extracellular electrophysiology data from Neuropixels probes
An alternative to MCMC for rapid analysis of models
A framework to build Software As A Service (SaaS) platforms for data analysis pipelines.
Enables data scientists to compose pipelines of analysis which consist of data manipulation, exploratory analysis & reporting, as well as modeling steps. Data scientists can use tools of their choice through an R interface, and compose interoperable pipelines between R, Spark, and Python.
Environmental DNA metabarcoding taxonomic identification
vSNP -- validate SNPs
The MaNGA Data Analysis Pipeline
What people are tweeting about now, in your desired location? Live Streaming of Twitter Data to Spark and Tweet Analysis application on various trends Eg: Trending HashTags, Trending Mentions etc. Location based features supported.
Analysis pipeline capable of searching for dark compact objects in the Milky Way through astrometric lensing in real or mock Gaia DR4 data.
Automated and friendly RNA-seq analysis (deprecated)
Gradle tools to analyze bitcode of a Kotlin/Native project
Lena is an architectural framework for data analysis
AcetoScan - Automated pipeline for the unsupervised analysis of FTHFS amplicon sequencing
vSNP -- validate SNPs
PipiDABS: A Comprehensive and User-Friendly Pipeline for Downstream DNA Methylation Analysis of High-throughput Bisulfite Sequencing Data.
KREWS Scientific Data Pipeline Framework
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