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Issues list

Calib uses more than 128 GB memory on two 1.2 GB FASTQ files
#47 by rhpvorderman was closed Apr 11, 2022
2
Error when used conda calib
#46 by kabilov was closed Jul 13, 2022
4
Getting an "ERROR: Something is fishy with read:" error
#45 by kartikchandran was closed Dec 22, 2021
4
Calib run error: Segmentation Fault 11
#44 by kartikchandran was closed Oct 18, 2021
23
Input: Quality sequence needed?
#43 by kmoosi was closed Sep 21, 2021
1
How do I obtaining the default parameters
#42 by euphowayne78 was closed Jun 24, 2021
1
not working without parameter selction
#41 by kmoosi was closed Jul 19, 2021
@baraaorabi
11
using -p for reads with umi one one read only
#40 by alexander-e-f-smith was closed May 26, 2021
1
barcode at 3' end
#39 by kmoosi was closed May 26, 2021
@baraaorabi
1
Seg fault on multiple files and default parameters not selected
#37 by laurapspector was closed Jul 13, 2022
4
dealing with UMIs containing N
#36 by rmvpaeme was closed Oct 16, 2020
@baraaorabi
2
gzip input
#35 by ruolin was closed Nov 6, 2020
@baraaorabi
4
default output for base quality when setting -m 1
#34 by alexander-e-f-smith was closed Oct 16, 2020
@baraaorabi
1
quality scores of consensus sequences
#33 by rmvpaeme was closed Oct 16, 2020
@baraaorabi
1
sample index and barcode in deduplicated reads
#32 by sneha-nishtala was closed Aug 4, 2020
2
What's the best way to generate de-duplicated fastq files from the cluster file?
#31 by sneha-nishtala was closed Jul 8, 2020
6
Using Calib with 4 input fastqs question
#30 by sneha-nishtala was closed Jun 24, 2020
@baraaorabi
2
Clustering and error correction for duplex sequencing
#29 by kanika-arora was closed Jun 26, 2020
3
calib and use with conda
#28 by ChadFibke was closed Jun 17, 2020
13
experiments/parameter_tests/README.md broken link
#27 by corburn was closed Jun 24, 2020
how to deal with read pairs with opposite barcode
#24 by lihang598602 was closed Jun 11, 2020
UMI only at Read2
#23 by amufaamo was closed Jan 21, 2019
1
Single-end support feature
#22 by baraaorabi was closed Apr 5, 2021
10
Get rid of HTML files somehow
#21 by baraaorabi was closed Jun 11, 2020
Travis testing
#20 by baraaorabi was closed Jun 11, 2020
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