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99 Open 842 Closed
99 Open 842 Closed
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Issues list

Runtime error of "Can't apply step BuildingInitialTrees" when running findShmTrees
#1708 opened Jun 30, 2024 by omegahh
4 tasks
Postanalysis output explanation
#1705 opened Jun 27, 2024 by pbpayal
findAlleles get empty clone data
#1697 opened Jun 17, 2024 by liu9756
3
FASTQ and BAM give discordant results
#1691 opened Jun 12, 2024 by vincentwalter
4
The problem of mixcr exportPlots shmTrees
#1686 opened Jun 9, 2024 by WZQ6
1
How to perform MiXCR on my spatial TCR data
#1684 opened Jun 5, 2024 by yuyuleung
Un-identified isotypes
#1054 opened Mar 23, 2023 by ligalaizik
4 tasks
15
Marks of reference points on line break in exportAlignmentsPretty
#1049 opened Mar 21, 2023 by gnefedev
Merging mixcr scRNA-seq output with Seurat data
#1020 opened Feb 28, 2023 by meghatron21
1
error plotting over ssh with X11 forwarding
#1013 opened Feb 17, 2023 by DzmitryGB
1
Add ability to filter alignments by barcode value in exportAlignmentsPretty
#1007 opened Feb 13, 2023 by PoslavskySV
@gnefedev
Add mutations count in export
#995 opened Feb 1, 2023 by PoslavskySV
@gnefedev
exportClones with "-tagCounts" argument returns inconsistent type in the "tagCounts" for clones with a single tag
#981 opened Jan 18, 2023 by esanal
"mixcr postanalysis overlap --factor-by" + "mixcr exportPlots overlap... o.pdf" generates graphics with unadjusted text size
#974 opened Jan 14, 2023 by github-wow
small typos in help
#973 opened Jan 13, 2023 by github-wow
Is it possible to add date/time stamps in log file?
#971 opened Jan 13, 2023 by github-wow
No effect from "--pairwise-comparisons" option in "exportPlots"
#970 opened Jan 12, 2023 by github-wow
"Disorder" seems to be not in the default output
#969 opened Jan 12, 2023 by github-wow
Is it possible to group samples by their group markers for heatplots?
#964 opened Jan 10, 2023 by github-wow
"command not found" for "--criteria"'s non-defaults values
#958 opened Jan 9, 2023 by github-wow
Unknown weight type: cell.
#951 opened Jan 7, 2023 by github-wow
Postanalysis V- J- usage: add filter by gene abundance
#899 opened Nov 23, 2022 by amikelov
Add mixcr qc tags plot for filters in mixcr assemble if present
#840 opened Oct 25, 2022 by mizraelson
Cluster samples visualization
#839 opened Oct 25, 2022 by mizraelson
Add Morisita Horm index to postanalysis overlap
#838 opened Oct 25, 2022 by mizraelson
1
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