5 more!

galaxyproject · mr-c · Sep 18, 2023 · Sep 18, 2023 · Sep 22, 2023 · Sep 25, 2023
commit 400928ad0ba1e515727a7921b60d74f21c274544
diff --git a/.all-contributorsrc b/.all-contributorsrc
@@ -254,15 +254,6 @@
         "code"
       ]
     },
-    {
-      "login": "abdulrahmanazab",
-      "name": "Abdulrahman Azab",
-      "avatar_url": "https://avatars.githubusercontent.com/u/11062692?v=4",
-      "profile": "https://www.usit.uio.no/english/about/organisation/rc/rss/staff/azab",
-      "contributions": [
-        "code"
-      ]
-    },
     {
       "login": "katrinleinweber",
       "name": "Katrin Leinweber",
@@ -416,15 +407,6 @@
         "code"
       ]
     },
-    {
-      "login": "moskalenko",
-      "name": "Oleksandr Moskalenko",
-      "avatar_url": "https://avatars.githubusercontent.com/u/151978?v=4",
-      "profile": "https://github.com/moskalenko",
-      "contributions": [
-        "code"
-      ]
-    },
     {
       "login": "odoppelt",
       "name": "odoppelt",
@@ -479,15 +461,6 @@
         "code"
       ]
     },
-    {
-      "login": "Petraea",
-      "name": "Petraea",
-      "avatar_url": "https://avatars.githubusercontent.com/u/5269432?v=4",
-      "profile": "https://github.com/Petraea",
-      "contributions": [
-        "code"
-      ]
-    },
     {
       "login": "lindenb",
       "name": "Pierre Lindenbaum",
@@ -560,15 +533,6 @@
         "code"
       ]
     },
-    {
-      "login": "sneumann",
-      "name": "Steffen Neumann",
-      "avatar_url": "https://avatars.githubusercontent.com/u/195385?v=4",
-      "profile": "https://github.com/sneumann",
-      "contributions": [
-        "code"
-      ]
-    },
     {
       "login": "thobalose",
       "name": "Thoba Lose",
@@ -623,15 +587,6 @@
         "code"
       ]
     },
-    {
-      "login": "tomithy",
-      "name": "tomithy",
-      "avatar_url": "https://avatars.githubusercontent.com/u/1452048?v=4",
-      "profile": "https://github.com/tomithy",
-      "contributions": [
-        "code"
-      ]
-    },
     {
       "login": "trevor",
       "name": "Trevor Wennblom",

diff --git a/MISSING.md b/MISSING.md
@@ -46,64 +46,57 @@ Thanks goes to these wonderful people. We still need them to re-license their pr
     <tr>
       <td align="center" valign="top" width="20%"><a href="http://github.com/junzwang"><img src="https://avatars.githubusercontent.com/u/16789060?v=4?s=150" width="150px;" alt="Junzhou"/></a><br /><sub><b>Junzhou (junzwang)</b></sub><br /></td>
       <td align="center" valign="top" width="20%"><a href="http://github.com/scrathat"><img src="https://avatars.githubusercontent.com/u/7573072?v=4?s=150" width="150px;" alt="Sebastian Kapust"/></a><br /><sub><b>Sebastian Kapust (scrathat)</b></sub><br /></td>
-      <td align="center" valign="top" width="20%"><a href="http://github.com/abdulrahmanazab"><img src="https://avatars.githubusercontent.com/u/11062692?v=4?s=150" width="150px;" alt="Abdulrahman Azab"/></a><br /><sub><b>Abdulrahman Azab (abdulrahmanazab)</b></sub><br /></td>
       <td align="center" valign="top" width="20%"><a href="http://github.com/katrinleinweber"><img src="https://avatars.githubusercontent.com/u/9948149?v=4?s=150" width="150px;" alt="Katrin Leinweber"/></a><br /><sub><b>Katrin Leinweber (katrinleinweber)</b></sub><br /></td>
       <td align="center" valign="top" width="20%"><a href="http://github.com/kidanem"><img src="https://avatars.githubusercontent.com/u/11715191?v=4?s=150" width="150px;" alt="Kidane M. Tekle"/></a><br /><sub><b>Kidane M. Tekle (kidanem)</b></sub><br /></td>
+      <td align="center" valign="top" width="20%"><a href="http://github.com/lawrence1470"><img src="https://avatars.githubusercontent.com/u/98620798?v=4?s=150" width="150px;" alt="lawrence nicastro"/></a><br /><sub><b>lawrence nicastro (lawrence1470)</b></sub><br /></td>
     </tr>
     <tr>
-      <td align="center" valign="top" width="20%"><a href="http://github.com/lawrence1470"><img src="https://avatars.githubusercontent.com/u/98620798?v=4?s=150" width="150px;" alt="lawrence nicastro"/></a><br /><sub><b>lawrence nicastro (lawrence1470)</b></sub><br /></td>
       <td align="center" valign="top" width="20%"><a href="http://github.com/leobiscassi"><img src="https://avatars.githubusercontent.com/u/1977418?v=4?s=150" width="150px;" alt="Léo Biscassi"/></a><br /><sub><b>Léo Biscassi (leobiscassi)</b></sub><br /></td>
       <td align="center" valign="top" width="20%"><a href="http://github.com/manabuishii"><img src="https://avatars.githubusercontent.com/u/7508005?v=4?s=150" width="150px;" alt="Manabu ISHII"/></a><br /><sub><b>Manabu ISHII (manabuishii)</b></sub><br /></td>
       <td align="center" valign="top" width="20%"><a href="http://github.com/vavrusa"><img src="https://avatars.githubusercontent.com/u/139311?v=4?s=150" width="150px;" alt="Marek Vavruša"/></a><br /><sub><b>Marek Vavruša (vavrusa)</b></sub><br /></td>
       <td align="center" valign="top" width="20%"><a href="http://github.com/dlal-group"><img src="https://avatars.githubusercontent.com/u/26526288?v=4?s=150" width="150px;" alt="dlal-group"/></a><br /><sub><b>dlal-group (dlal-group)</b></sub><br /></td>
+      <td align="center" valign="top" width="20%"><a href="http://github.com/markiskander"><img src="https://avatars.githubusercontent.com/u/14098761?v=4?s=150" width="150px;" alt="markiskander"/></a><br /><sub><b>markiskander (markiskander)</b></sub><br /></td>
     </tr>
     <tr>
-      <td align="center" valign="top" width="20%"><a href="http://github.com/markiskander"><img src="https://avatars.githubusercontent.com/u/14098761?v=4?s=150" width="150px;" alt="markiskander"/></a><br /><sub><b>markiskander (markiskander)</b></sub><br /></td>
       <td align="center" valign="top" width="20%"><a href="http://github.com/martijnvermaattest"><img src="https://avatars.githubusercontent.com/u/17727768?v=4?s=150" width="150px;" alt="martijnvermaattest"/></a><br /><sub><b>martijnvermaattest (martijnvermaattest)</b></sub><br /></td>
       <td align="center" valign="top" width="20%"><a href="http://github.com/MatthewRalston"><img src="https://avatars.githubusercontent.com/u/4308024?v=4?s=150" width="150px;" alt="Matt Ralston"/></a><br /><sub><b>Matt Ralston (MatthewRalston)</b></sub><br /></td>
       <td align="center" valign="top" width="20%"><a href="http://github.com/mepcotterell"><img src="https://avatars.githubusercontent.com/u/49024?v=4?s=150" width="150px;" alt="Michael Cotterell"/></a><br /><sub><b>Michael Cotterell (mepcotterell)</b></sub><br /></td>
       <td align="center" valign="top" width="20%"><a href="http://github.com/miloaec"><img src="https://avatars.githubusercontent.com/u/17707793?v=4?s=150" width="150px;" alt="miloaec"/></a><br /><sub><b>miloaec (miloaec)</b></sub><br /></td>
+      <td align="center" valign="top" width="20%"><a href="http://github.com/nagoue"><img src="https://avatars.githubusercontent.com/u/9028638?v=4?s=150" width="150px;" alt="Nadia Goué"/></a><br /><sub><b>Nadia Goué (nagoue)</b></sub><br /></td>
     </tr>
     <tr>
-      <td align="center" valign="top" width="20%"><a href="http://github.com/nagoue"><img src="https://avatars.githubusercontent.com/u/9028638?v=4?s=150" width="150px;" alt="Nadia Goué"/></a><br /><sub><b>Nadia Goué (nagoue)</b></sub><br /></td>
       <td align="center" valign="top" width="20%"><a href="http://github.com/NCEichner"><img src="https://avatars.githubusercontent.com/u/31483851?v=4?s=150" width="150px;" alt="Norbert Eichner"/></a><br /><sub><b>Norbert Eichner (NCEichner)</b></sub><br /></td>
       <td align="center" valign="top" width="20%"><a href="http://github.com/NicHerndon"><img src="https://avatars.githubusercontent.com/u/4636279?v=4?s=150" width="150px;" alt="Nic Herndon"/></a><br /><sub><b>Nic Herndon (NicHerndon)</b></sub><br /></td>
       <td align="center" valign="top" width="20%"><a href="http://github.com/npinter"><img src="https://avatars.githubusercontent.com/u/34959927?v=4?s=150" width="150px;" alt="Niko Pinter"/></a><br /><sub><b>Niko Pinter (npinter)</b></sub><br /></td>
       <td align="center" valign="top" width="20%"><a href="http://github.com/nturaga"><img src="https://avatars.githubusercontent.com/u/2746443?v=4?s=150" width="150px;" alt="Nitesh Turaga"/></a><br /><sub><b>Nitesh Turaga (nturaga)</b></sub><br /></td>
+      <td align="center" valign="top" width="20%"><a href="http://github.com/odoppelt"><img src="https://avatars.githubusercontent.com/u/2970530?v=4?s=150" width="150px;" alt="odoppelt"/></a><br /><sub><b>odoppelt (odoppelt)</b></sub><br /></td>
     </tr>
     <tr>
-      <td align="center" valign="top" width="20%"><a href="http://github.com/moskalenko"><img src="https://avatars.githubusercontent.com/u/151978?v=4?s=150" width="150px;" alt="Oleksandr Moskalenko"/></a><br /><sub><b>Oleksandr Moskalenko (moskalenko)</b></sub><br /></td>
-      <td align="center" valign="top" width="20%"><a href="http://github.com/odoppelt"><img src="https://avatars.githubusercontent.com/u/2970530?v=4?s=150" width="150px;" alt="odoppelt"/></a><br /><sub><b>odoppelt (odoppelt)</b></sub><br /></td>
       <td align="center" valign="top" width="20%"><a href="http://github.com/osallou"><img src="https://avatars.githubusercontent.com/u/1024098?v=4?s=150" width="150px;" alt="Olivier Sallou"/></a><br /><sub><b>Olivier Sallou (osallou)</b></sub><br /></td>
       <td align="center" valign="top" width="20%"><a href="http://github.com/cbare"><img src="https://avatars.githubusercontent.com/u/170360?v=4?s=150" width="150px;" alt="Christopher Bare"/></a><br /><sub><b>Christopher Bare (cbare)</b></sub><br /></td>
       <td align="center" valign="top" width="20%"><a href="http://github.com/claresloggett"><img src="https://avatars.githubusercontent.com/u/1815107?v=4?s=150" width="150px;" alt="claresloggett"/></a><br /><sub><b>claresloggett (claresloggett)</b></sub><br /></td>
-    </tr>
-    <tr>
       <td align="center" valign="top" width="20%"><a href="http://github.com/dan-blanchard"><img src="https://avatars.githubusercontent.com/u/976345?v=4?s=150" width="150px;" alt="Dan Blanchard"/></a><br /><sub><b>Dan Blanchard (dan-blanchard)</b></sub><br /></td>
       <td align="center" valign="top" width="20%"><a href="http://github.com/ffinfo"><img src="https://avatars.githubusercontent.com/u/2419555?v=4?s=150" width="150px;" alt="Peter van 't Hof"/></a><br /><sub><b>Peter van 't Hof (ffinfo)</b></sub><br /></td>
-      <td align="center" valign="top" width="20%"><a href="http://github.com/Petraea"><img src="https://avatars.githubusercontent.com/u/5269432?v=4?s=150" width="150px;" alt="Petraea"/></a><br /><sub><b>Petraea (Petraea)</b></sub><br /></td>
-      <td align="center" valign="top" width="20%"><a href="http://github.com/lindenb"><img src="https://avatars.githubusercontent.com/u/33838?v=4?s=150" width="150px;" alt="Pierre Lindenbaum"/></a><br /><sub><b>Pierre Lindenbaum (lindenb)</b></sub><br /></td>
-      <td align="center" valign="top" width="20%"><a href="http://github.com/ramezrawas"><img src="https://avatars.githubusercontent.com/u/16448081?v=4?s=150" width="150px;" alt="Ramez Alrawas"/></a><br /><sub><b>Ramez Alrawas (ramezrawas)</b></sub><br /></td>
     </tr>
     <tr>
+      <td align="center" valign="top" width="20%"><a href="http://github.com/lindenb"><img src="https://avatars.githubusercontent.com/u/33838?v=4?s=150" width="150px;" alt="Pierre Lindenbaum"/></a><br /><sub><b>Pierre Lindenbaum (lindenb)</b></sub><br /></td>
+      <td align="center" valign="top" width="20%"><a href="http://github.com/ramezrawas"><img src="https://avatars.githubusercontent.com/u/16448081?v=4?s=150" width="150px;" alt="Ramez Alrawas"/></a><br /><sub><b>Ramez Alrawas (ramezrawas)</b></sub><br /></td>
       <td align="center" valign="top" width="20%"><a href="http://github.com/ratzeni"><img src="https://avatars.githubusercontent.com/u/428210?v=4?s=150" width="150px;" alt="Rossano Atzeni"/></a><br /><sub><b>Rossano Atzeni (ratzeni)</b></sub><br /></td>
       <td align="center" valign="top" width="20%"><a href="http://github.com/remimarenco"><img src="https://avatars.githubusercontent.com/u/2152858?v=4?s=150" width="150px;" alt="Rémi Marenco"/></a><br /><sub><b>Rémi Marenco (remimarenco)</b></sub><br /></td>
       <td align="center" valign="top" width="20%"><a href="http://github.com/rdallet"><img src="https://avatars.githubusercontent.com/u/33418051?v=4?s=150" width="150px;" alt="Romain Dallet"/></a><br /><sub><b>Romain Dallet (rdallet)</b></sub><br /></td>
-      <td align="center" valign="top" width="20%"><a href="http://github.com/golharam"><img src="https://avatars.githubusercontent.com/u/671079?v=4?s=150" width="150px;" alt="Ryan Golhar"/></a><br /><sub><b>Ryan Golhar (golharam)</b></sub><br /></td>
-      <td align="center" valign="top" width="20%"><a href="http://github.com/sszakony"><img src="https://avatars.githubusercontent.com/u/9634629?v=4?s=150" width="150px;" alt="Scott Szakonyi"/></a><br /><sub><b>Scott Szakonyi (sszakony)</b></sub><br /></td>
     </tr>
     <tr>
+      <td align="center" valign="top" width="20%"><a href="http://github.com/golharam"><img src="https://avatars.githubusercontent.com/u/671079?v=4?s=150" width="150px;" alt="Ryan Golhar"/></a><br /><sub><b>Ryan Golhar (golharam)</b></sub><br /></td>
+      <td align="center" valign="top" width="20%"><a href="http://github.com/sszakony"><img src="https://avatars.githubusercontent.com/u/9634629?v=4?s=150" width="150px;" alt="Scott Szakonyi"/></a><br /><sub><b>Scott Szakonyi (sszakony)</b></sub><br /></td>
       <td align="center" valign="top" width="20%"><a href="http://github.com/saxtouri"><img src="https://avatars.githubusercontent.com/u/3098971?v=4?s=150" width="150px;" alt="Stavros Sachtouris"/></a><br /><sub><b>Stavros Sachtouris (saxtouri)</b></sub><br /></td>
-      <td align="center" valign="top" width="20%"><a href="http://github.com/sneumann"><img src="https://avatars.githubusercontent.com/u/195385?v=4?s=150" width="150px;" alt="Steffen Neumann"/></a><br /><sub><b>Steffen Neumann (sneumann)</b></sub><br /></td>
       <td align="center" valign="top" width="20%"><a href="http://github.com/thobalose"><img src="https://avatars.githubusercontent.com/u/5425346?v=4?s=150" width="150px;" alt="Thoba Lose"/></a><br /><sub><b>Thoba Lose (thobalose)</b></sub><br /></td>
       <td align="center" valign="top" width="20%"><a href="http://github.com/tmcgowan"><img src="https://avatars.githubusercontent.com/u/7782986?v=4?s=150" width="150px;" alt="Thomas McGowan"/></a><br /><sub><b>Thomas McGowan (tmcgowan)</b></sub><br /></td>
-      <td align="center" valign="top" width="20%"><a href="http://github.com/ThomasWollmann"><img src="https://avatars.githubusercontent.com/u/6473917?v=4?s=150" width="150px;" alt="Thomas Wollmann"/></a><br /><sub><b>Thomas Wollmann (ThomasWollmann)</b></sub><br /></td>
     </tr>
     <tr>
+      <td align="center" valign="top" width="20%"><a href="http://github.com/ThomasWollmann"><img src="https://avatars.githubusercontent.com/u/6473917?v=4?s=150" width="150px;" alt="Thomas Wollmann"/></a><br /><sub><b>Thomas Wollmann (ThomasWollmann)</b></sub><br /></td>
       <td align="center" valign="top" width="20%"><a href="http://github.com/thomcuddihy"><img src="https://avatars.githubusercontent.com/u/5326997?v=4?s=150" width="150px;" alt="thom"/></a><br /><sub><b>thom (thomcuddihy)</b></sub><br /></td>
       <td align="center" valign="top" width="20%"><a href="http://github.com/XDtim"><img src="https://avatars.githubusercontent.com/u/29701877?v=4?s=150" width="150px;" alt="Tim Thompson"/></a><br /><sub><b>Tim Thompson (XDtim)</b></sub><br /></td>
       <td align="center" valign="top" width="20%"><a href="http://github.com/tshtatland"><img src="https://avatars.githubusercontent.com/u/16547000?v=4?s=150" width="150px;" alt="Timur Shtatland"/></a><br /><sub><b>Timur Shtatland (tshtatland)</b></sub><br /></td>
-      <td align="center" valign="top" width="20%"><a href="http://github.com/tomithy"><img src="https://avatars.githubusercontent.com/u/1452048?v=4?s=150" width="150px;" alt="tomithy"/></a><br /><sub><b>tomithy (tomithy)</b></sub><br /></td>
       <td align="center" valign="top" width="20%"><a href="http://github.com/trevor"><img src="https://avatars.githubusercontent.com/u/5945?v=4?s=150" width="150px;" alt="Trevor Wennblom"/></a><br /><sub><b>Trevor Wennblom (trevor)</b></sub><br /></td>
     </tr>
     <tr>

diff --git a/doc/relicensing/status.txt b/doc/relicensing/status.txt
@@ -232,6 +232,11 @@ stevecassidy, steve.cassidy@mq.edu.au, https://github.com/galaxyproject/galaxy/p
 takawitter, takao.nakaguchi@gmail.com, https://github.com/galaxyproject/galaxy/pull/16970#pullrequestreview-2149953931
 chrisbarnettster, chris.barnett@uct.ac.za, https://github.com/galaxyproject/galaxy/pull/16970#pullrequestreview-2149963693
 BradHolmes, holmesbr@ncbi.nlm.nih.gov, https://github.com/galaxyproject/galaxy/pull/16970#issuecomment-1792780245
+abdulrahmanazab, eng.azab@gmail.com, https://github.com/galaxyproject/galaxy/pull/16970#issuecomment-2198545978
+tomithy, tomithy.too@gmail.com, https://github.com/galaxyproject/galaxy/pull/16970#pullrequestreview-2150199047
+moskalenko, om@rc.ufl.edu, https://github.com/galaxyproject/galaxy/pull/16970#pullrequestreview-2150205033
+sneumann, sneumann@ipb-halle.de, https://github.com/galaxyproject/galaxy/pull/16970#pullrequestreview-2150606285
+Petraea, Petraea@users.noreply.github.com, https://github.com/galaxyproject/galaxy/pull/16970#pullrequestreview-2150708344
 
 # not yet agreed, needs research
 # GitHub username or NA, Name, email address, Comment
@@ -303,11 +308,9 @@ NCEichner, Norbert Eichner, norbert.eichner@ur.de
 NicHerndon, Nic Herndon, nic.herndon@uconn.edu
 npinter, Niko Pinter, 34959927+npinter@users.noreply.github.com
 nturaga, Nitesh Turaga, nitesh.turaga@gmail.com
-moskalenko, Oleksandr Moskalenko, om@rc.ufl.edu
 odoppelt, Olivia Doppelt-Azeroual, olivia.doppelt@pasteur.fr
 osallou, Olivier Sallou, olivier.sallou@gmail.com
 ffinfo, Peter van 't Hof, pjrvanthof@gmail.com
-Petraea, Petraea, Petraea@users.noreply.github.com
 lindenb, Pierre Lindenbaum, plindenbaum@yahoo.fr
 NA, Radhesh Kamath, radhesh@bx.psu.edu
 NA, Raj Ayyampalayam, raj76@uga.edu
@@ -324,14 +327,12 @@ sszakony, Scott Szakonyi, sszakony@nd.edu
 simleo, Simone Leo, simone.leo@gmail.com
 tesujimath, Simon Guest, simon.guest@agresearch.co.nz
 saxtouri, Stavros Sachtouris, saxtouri@admin.grnet.gr
-sneumann, Steffen Neumann, sneumann@ipb-halle.de
 thobalose, Thoba Lose, lose.thoba@gmail.com
 tmcgowan, Thomas McGowan, mcgo0092@umn.edu
 ThomasWollmann, Thomas Wollmann, thomas.s.wollmann@gmail.com
 thomcuddihy, Thom Cuddihy, thom@hometreelab.com
 XDtim, Tim Thompson, tim.thompson@xdbio.com
 tshtatland, Timur Shtatland, shtatland@neb.com
-tomithy, Tomithy Too, tomithy.too@gmail.com
 trevor, Trevor Wennblom,trevor@well.com
 NA, Wen-Yu Chung, wychung@bx.psu.edu,last contribution in 2009
 WilliamHolden, William Holden, theappdev@protonmail.com
@@ -343,7 +344,6 @@ NA, Yi Zhang, yizhang@bx.psu.edu, last contribution in 2007
 ycgong, Yunchen Gong, yunchen.gong@gmail.com
 
 # not agreed, but contributions no longer present
-Abdulrahman Azab <eng.azab@gmail.com> # GH user: abdulrahmanazab, one-line contribution, rewritten by John Chilton
 Andrea Sbardellati <andrea.sbardellati@crs4.it>  # only one commit to bowtie2 wrapper, since moved to the tool shed
 Christopher Bare <christopherbare@gmail.com>  # GH user: cbare, contribution reverted or otherwise unused
 Clare Sloggett <sloc@unimelb.edu.au>  # GH user: claresloggett, code heavily refactored since 2012 contribution