Update version numbers for v1.1.

PiperOrigin-RevId: 495067827
google · Dec 13, 2022 · 63d7e03 · 63d7e03
1 parent 7bbdcf1
commit 63d7e03
Show file tree

Hide file tree

Showing 5 changed files with 12 additions and 12 deletions.
diff --git a/README.md b/README.md
@@ -76,15 +76,15 @@ to inspect some example model inputs and outputs.
 If you're on a GPU machine:
 
 ```bash
-pip install deepconsensus[gpu]==1.0.1
+pip install deepconsensus[gpu]==1.1.0
 # To make sure the `deepconsensus` CLI works, set the PATH:
 export PATH="/home/${USER}/.local/bin:${PATH}"
 ```
 
 If you're on a CPU machine:
 
 ```bash
-pip install deepconsensus[cpu]==1.0.1
+pip install deepconsensus[cpu]==1.1.0
 # To make sure the `deepconsensus` CLI works, set the PATH:
 export PATH="/home/${USER}/.local/bin:${PATH}"
 ```
@@ -94,13 +94,13 @@ export PATH="/home/${USER}/.local/bin:${PATH}"
 For GPU:
 
 ```bash
-sudo docker pull google/deepconsensus:1.0.0-gpu
+sudo docker pull google/deepconsensus:1.1.0-gpu
 ```
 
 For CPU:
 
 ```bash
-sudo docker pull google/deepconsensus:1.0.0
+sudo docker pull google/deepconsensus:1.1.0
 ```
 
 ### From source

diff --git a/README_pip.md b/README_pip.md
@@ -3,15 +3,15 @@
 If you're on a GPU machine:
 
 ```bash
-pip install deepconsensus[gpu]==1.0.1
+pip install deepconsensus[gpu]==1.1.0
 # To make sure the `deepconsensus` CLI works, set the PATH:
 export PATH="/home/${USER}/.local/bin:${PATH}"
 ```
 
 If you're on a CPU machine:
 
 ```bash
-pip install deepconsensus[cpu]==1.0.1
+pip install deepconsensus[cpu]==1.1.0
 # To make sure the `deepconsensus` CLI works, set the PATH:
 export PATH="/home/${USER}/.local/bin:${PATH}"
 ```

diff --git a/deepconsensus/utils/dc_constants.py b/deepconsensus/utils/dc_constants.py
@@ -33,7 +33,7 @@
 import tensorflow as tf
 
 # DeepConsensus Version
-__version__ = '1.0.1'
+__version__ = '1.1.0'
 
 # Vocab
 GAP = ' '

diff --git a/docs/quick_start.md b/docs/quick_start.md
@@ -100,10 +100,10 @@ QS_DIR="${HOME}/deepconsensus_quick_start"
 mkdir -p "${QS_DIR}" "${QS_DIR}/model"
 
 # Download the input PacBio Subread data.
-gsutil cp gs://brain-genomics-public/research/deepconsensus/quickstart/v1.0/n1000.subreads.bam "${QS_DIR}"/
+gsutil cp gs://brain-genomics-public/research/deepconsensus/quickstart/v1.1/n1000.subreads.bam "${QS_DIR}"/
 
 # Download the DeepConsensus model.
-gsutil cp -r gs://brain-genomics-public/research/deepconsensus/models/v1.0/model_checkpoint/* "${QS_DIR}"/model/
+gsutil cp -r gs://brain-genomics-public/research/deepconsensus/models/v1.1/model_checkpoint/* "${QS_DIR}"/model/
 ```
 
 This directory should now contain the following files:
@@ -133,8 +133,8 @@ the appropriate version (CPU / GPU) depending on your use case.
 
 ```bash
 # Define DOCKER_IMAGE *once* depending on whether you will be using CPU or GPU:
-DOCKER_IMAGE=google/deepconsensus:1.0.0  # For CPU
-DOCKER_IMAGE=google/deepconsensus:1.0.0-gpu  # For GPU
+DOCKER_IMAGE=google/deepconsensus:1.1.0  # For CPU
+DOCKER_IMAGE=google/deepconsensus:1.1.0-gpu  # For GPU
 sudo docker pull ${DOCKER_IMAGE}
 ```
 

diff --git a/notebooks/Inspecting_DeepConsensus_examples_and_running_model.ipynb b/notebooks/Inspecting_DeepConsensus_examples_and_running_model.ipynb
@@ -251,7 +251,7 @@
       ],
       "source": [
         "! pip install --upgrade pip setuptools wheel\n",
-        "! pip install deepconsensus[cpu]==1.0.1"
+        "! pip install deepconsensus[cpu]==1.1.0"
       ]
     },
     {