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 r1.2

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anastasiyabl

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Commits on Mar 8, 2023

• Add instructions for setting up the VM.

  anastasiyabl

  committedMar 8, 2023
  979108d

Commits on Mar 1, 2023

• Update README and docs.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedMar 1, 2023
  c95d8cd

Commits on Feb 28, 2023

• Fix deepconsensus filter_reads cli.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedFeb 28, 2023
  82df652

• Update inspecting examples colab.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedFeb 28, 2023
  7dd3bb0

• Small fix to path in training tutorial.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedFeb 28, 2023
  21a5346

Commits on Feb 24, 2023

• Add 'pyproject.toml' for pip installation to address DEPRECATION warning

  

  anastasiyabl

  authored and

  Copybara-Service

  committedFeb 24, 2023
  0750611

Commits on Feb 23, 2023

• Add calibration page.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedFeb 23, 2023
  10114e6

Commits on Feb 17, 2023

• Update yield and runtime metrics with v1.2.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedFeb 17, 2023
  b11d0c4

• Update version numbers for v1.2.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedFeb 17, 2023
  77798d6

Commits on Feb 15, 2023

• Update assembly metrics for v1.2.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedFeb 15, 2023
  f0f5dd0

Commits on Feb 10, 2023

• Enable making tf examples with maize data.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedFeb 10, 2023
  c11b5a1

Commits on Feb 8, 2023

• Uncap base quality scores to 93 by default.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedFeb 8, 2023
  8b87555

Commits on Jan 31, 2023

• Update tensorflow-related packages to tf2.9 version.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedJan 31, 2023
  ad16825

Commits on Dec 15, 2022

• Fix remaining version numbers for the release.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedDec 15, 2022
  eb347bb

• Update tensorflow-related packages to the latest version.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedDec 15, 2022
  12e0007

Commits on Dec 14, 2022

• Update inspecting examples colab.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedDec 14, 2022
  24ef0f0

• Fix warnings.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedDec 14, 2022
  6b6243c

• Bump remaining version numbers.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedDec 14, 2022
  32049b2

• Update Runtime metrics page.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedDec 14, 2022
  5dd53fc

Commits on Dec 13, 2022

• Update version numbers for v1.1.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedDec 13, 2022
  63d7e03

Commits on Dec 12, 2022

• Update Yield metrics page for v1.1.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedDec 12, 2022
  afb42ef

• Update assembly metrics for v1.1.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedDec 12, 2022
  4d50602

Commits on Dec 8, 2022

• Update the config with values used in v1.1.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedDec 8, 2022
  35d295b

Commits on Nov 2, 2022

• Restore from latest checkpoint instead of the checkpoint at epoch beginning.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedNov 2, 2022
  71f88dd

Commits on Oct 13, 2022

• Update params to match the chosen model for DC 1.0 release.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedOct 13, 2022
  16d2762

Commits on Sep 20, 2022

• Change learning rate schedule (warmup and decay) and add LAMB optimizer with best hparams.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedSep 20, 2022
  6dbd121

Commits on Sep 16, 2022

• Add distillation with MSE loss between logits.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedSep 16, 2022
  df4a49a

Commits on Aug 26, 2022

• Add new tensorflow metrics and remove uninformative ones.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedAug 26, 2022
  6f4443e

Commits on Aug 12, 2022

• Move from eval/loss to eval/per_example_accuracy as the main evaluation metric.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedAug 12, 2022
  0b5ada3

Commits on Jul 27, 2022

• Change logging of losses.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedJul 27, 2022
  5ba66da

Commits on Jul 25, 2022

• Enable access to intermediate model outputs.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedJul 25, 2022
  0609176

Commits on Jul 16, 2022

• Change naming of metrics.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedJul 16, 2022
  1da3af4

Commits on Jul 1, 2022

• Small fixes to open-source documentation.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedJul 1, 2022
  9212b32

Commits on Jun 29, 2022

• Update tf version to >= 2.9 and remove remaining dependencies on tensorflow_models.official.legacy.transformer

  

  anastasiyabl

  authored and

  Copybara-Service

  committedJun 29, 2022
  f25f44e

Commits on Jun 10, 2022

• Enable initialization of student model weight from teacher model.

  

  anastasiyabl

  authored and

  Copybara-Service

  committedJun 10, 2022
  ff49be8

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