Update tensorflow-related packages to the latest version.

PiperOrigin-RevId: 495494870
google · Dec 15, 2022 · 12e0007 · 12e0007
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commit 12e0007
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Showing 5 changed files with 8 additions and 8 deletions.
diff --git a/docs/quick_start.md b/docs/quick_start.md
@@ -303,8 +303,8 @@ deepconsensus run \
 At the end of your run, you should see:
 
 ```
-Processed 178 ZMWs in 263.359 seconds
-Outcome counts: OutcomeCounter(empty_sequence=0, only_gaps=0, failed_quality_filter=4, failed_length_filter=0, success=174)
+Processed 178 ZMWs in 230.602 seconds
+Outcome counts: OutcomeCounter(empty_sequence=0, only_gaps=0, failed_quality_filter=1, failed_length_filter=0, success=177)
 ```
 
 ## Optimizing Runtime

diff --git a/install-gpu.sh b/install-gpu.sh
@@ -57,4 +57,4 @@ echo "$(pip --version)"
 # Install python packages used by DeepConsensus.
 ################################################################################
 python3 -m pip install --user -r requirements.txt
-python3 -m pip install --user "tensorflow-gpu>=2.9.0"
+python3 -m pip install --user "tensorflow-gpu>=2.11.0"
diff --git a/install.sh b/install.sh
@@ -57,4 +57,4 @@ echo "$(pip --version)"
 # Install python packages used by DeepConsensus.
 ################################################################################
 python3 -m pip install --user -r requirements.txt
-python3 -m pip install --user "intel-tensorflow>=2.9.0"
+python3 -m pip install --user "intel-tensorflow>=2.11.0"
diff --git a/requirements.txt b/requirements.txt
@@ -4,9 +4,9 @@
 # incompatible when flexible versioning is used.
 # DeepConsensus should be used in a dedicated python virtualenv.
 pandas==1.5.1
-tf-models-official==2.9.2
+tf-models-official==2.11.0
 pyyaml==5.4.1  # because of tf-models-official
 ml_collections==0.1.1
 absl-py==1.0.0
-keras==2.9.0
+keras==2.11.0
 pysam==0.19.0
diff --git a/setup.py b/setup.py
@@ -43,8 +43,8 @@
 REQUIREMENTS = (here / 'requirements.txt').read_text().splitlines()
 EXTRA_REQUIREMENTS = {
     # Use '==' to pin the versions.
-    'cpu': ['intel-tensorflow==2.9.1'],
-    'gpu': ['tensorflow-gpu==2.9.1']
+    'cpu': ['intel-tensorflow==2.11.0'],
+    'gpu': ['tensorflow-gpu==2.11.0']
 }