An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
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Updated
Apr 7, 2024 - C++
An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
Versatile open-source tool for microbiome analysis
The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.
FastQC port to Qt5: A quality control tool for high throughput sequence data.
memory efficient, fast & precise taxnomomic classification system for metagenomic read mapping
Fast FASTA/Q parser and writer (C++ re-implementation of kseq library)
Fast and accurate sequence demultiplexing
DuckDB Extension for reading and writing FASTA and FASTQ Files
BioC++ Input/Output library
Extract sequences from a fastx file given a subsequence or identifier
HUMID: reference free FastQ deduplication
reference-free base quality score recalibration
Super ultra-fast fastq preprocessor, using parallel windowed adaptive trimming.
Vim-like program for viewing genetic sequences on the command line (ncurses).
Basic seed-and-extend DNA sequence read aligner
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