ngs
Here are 32 public repositories matching this topic...
Official code repository for GATK versions 4 and up
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Jul 2, 2024 - Java
Java utilities for Bioinformatics
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Jul 2, 2024 - Java
Big Data tool for scalable short-read error correction
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Mar 12, 2024 - Java
Fonda is a framework which offers scalable and automatic analysis of multiple NGS sequencing data types
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Jan 11, 2024 - Java
sparkhit - analyzing large scale genomic data on the cloud
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Apr 17, 2023 - Java
HaploGrep - mtDNA haplogroup classification. Supporting rCRS and RSRS.
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Feb 28, 2023 - Java
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Dec 2, 2022 - Java
Apache Spark application for filtering and reporting clinically relevant variants
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Apr 25, 2022 - Java
MegaPath: sensitive and rapid pathogen detection using metagenomic NGS data; MegaPath-Amplicon: filtering module for metagenomic amplicon data
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Feb 10, 2022 - Java
microRNA validation using Spark framework
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Sep 28, 2021 - Java
The mitochondrial workbench
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Sep 17, 2021 - Java
A program which can assembing .fasta file generated by Next Generation Sequencing(NGS) de novo using De Bruijn Graph Algorithm, and can also choose to map(BLAST) the contigs to a reference sequence
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Oct 9, 2020 - Java
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