scverse
Here are 22 public repositories matching this topic...
scverse lineage tracing analysis toolkit
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Jun 28, 2024 - Python
Awesome GRN enhanced AnnData toolkit
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Jun 24, 2024 - Python
anndata with trees
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Jun 24, 2024 - Python
A single cell transcriptomics pipeline for QC, integration and making the data presentable
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Jul 1, 2024 - Nextflow
experimental interface between R and scvi-tools
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Mar 20, 2024 - R
Download and Convert METASPACE datasets to common formats such as AnnData or SpatialData
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Mar 16, 2024 - Python
Tutorials for multimodal omics data analysis
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Jun 27, 2022 - Jupyter Notebook
Muon for Julia
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Mar 20, 2024 - Julia
Notebooks used in scvi-tools tutorials
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Jun 27, 2024 - Jupyter Notebook
Multimodal Data (.h5mu) implementation for Python
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Jun 30, 2024 - Python
Perturbation Analysis in the scverse ecosystem.
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Jun 24, 2024 - Python
Rapids_singlecell: A GPU-accelerated tool for scRNA analysis. Offers seamless scverse compatibility for efficient single-cell data processing and analysis.
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Jul 1, 2024 - Python
Infer copy number variation (CNV) from scRNA-seq data. Plays nicely with Scanpy.
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Jun 26, 2024 - Python
Electronic Health Record Analysis with Python.
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Jun 28, 2024 - Python
muon is a multimodal omics Python framework
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May 30, 2024 - Python
Annotated data.
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Jul 1, 2024 - Python
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