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Pull requests: sourmash-bio/sourmash

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Pull requests list

Added jupyter notebooks
#36 opened Aug 23, 2016 by anmwinter Loading…
5 tasks
[WIP] Fix MinHash merge of abund + noabund objects (rust). rust
#1395 opened Mar 14, 2021 by ctb Loading…
5 tasks
Feature: FFI for Rust LinearIndex
#2727 opened Aug 20, 2023 by luizirber • Draft
Feature: Mutable/Frozen MH in FFI
#2728 opened Aug 21, 2023 by luizirber • Draft
Bump fixedbitset from 0.4.2 to 0.5.7 dependencies Pull requests that update a dependency file rust
#3117 opened Apr 15, 2024 by dependabot bot Loading…
add DNA/protein check on first 100 bp of FASTA files
#1037 opened Jun 21, 2020 by ctb Loading…
5 tasks
1
[WIP] Ertl estimators for scaled minhash
#1270 opened Jan 6, 2021 by luizirber Loading…
7 tasks
1
[EXP] Build a storage plugin interface.
#1368 opened Mar 5, 2021 by ctb Loading…
5 tasks
1
[EXP] use codon degeneracy to properly translate edge amino acids if possible
#1579 opened Jun 10, 2021 by bluegenes Loading…
1
[WIP] Adding some docstrings
#1583 opened Jun 11, 2021 by hehouts Loading…
1
[WIP] Start documenting the Rust API
#1584 opened Jun 12, 2021 by luizirber Loading…
1
[EXP] a simple JSON RPC client for sourmash search
#1644 opened Jun 27, 2021 by ctb Loading…
1
[WIP] a demonstration of/documentation for some Storage functionality
#1758 opened Oct 20, 2021 by ctb Loading…
1
[EXP] add an Index class that loads directly from a screed-loadable file
#1783 opened Jan 6, 2022 by ctb Loading…
1
[EXP] try out making a cover for the prefetch results
#1853 opened Feb 26, 2022 by ctb Loading…
1
[EXP] cache frozen properties
#2135 opened Jul 22, 2022 by ctb Loading…
1
[EXP] support taxonomies in zipfiles
#2202 opened Aug 13, 2022 by ctb Loading…
1
1
[WIP] begin adding the machinery for CSV column renaming
#2274 opened Sep 8, 2022 by ctb Loading…
1 task
1
EXP: try out some new manifest methods
#2599 opened Apr 30, 2023 by ctb Loading…
1
WIP: check for unknown kwargs in Index.select
#2663 opened Jun 28, 2023 by ctb Loading…
2
WIP: update developer instructions
#2811 opened Oct 15, 2023 by ctb Loading…
1
1
WIP: fix weird failing gather
#2832 opened Nov 1, 2023 by ctb Loading…
1
WIP: Fix sig kmers
#2856 opened Nov 29, 2023 by ctb Loading…
1
1
Use cargo llvm-cov for coverage reports
#2993 opened Feb 11, 2024 by luizirber • Draft
1
Add license scan report and status
#3011 opened Feb 17, 2024 by fossabot Loading…
1
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