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Issues list

Error with --physical-coverage
#2 by telatin was closed Jan 2, 2020
1
Maximum coverage > 2**16
#7 by telatin was closed Mar 2, 2020
JOSS tracking joss
#3 by brentp was closed Mar 2, 2020
5
Please expand benchmarking joss
#6 by jdeligt was closed Mar 2, 2020
3
Discrepancy in example output joss
#5 by jdeligt was closed Mar 2, 2020
4
User friendly error if BAM is unsorted enhancement New feature or request
#8 by telatin was closed Mar 3, 2020
1
Assertion `coverage_ends.empty()' failed. bug Something isn't working
#11 by telatin was closed Sep 8, 2020
1
Add CRAM support enhancement New feature or request
#4 by telatin was closed Sep 8, 2020
1
Program fails (Assertion `!more_alignments' failed.)
#1 by telatin was closed Dec 17, 2019
1
Adding bed file support enhancement New feature or request
#10 by bilgehannevruz was closed Dec 10, 2020
4
[Bug] stranded output on adjacent reads bug Something isn't working
#12 by telatin was closed Oct 28, 2021
1
add test for stranded output enhancement New feature or request
#13 by telatin was closed Oct 28, 2021
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