Analyze your RNA sequencing data without writing a single line of code

Data intensive science for everyone.

ARG normalization by mapping to the ARO ontology.

Revolutionizing DNA analysis and making it accessible to all through innovative AI-powered analysis and interpretive tools.

GCModeller: genomics CAD(Computer Assistant Design) Modeller system in .NET language

P2Rank: Protein-ligand binding site prediction tool based on machine learning. Stand-alone command line program / Java library for predicting ligand binding pockets from protein structure.

Aim to be the bioinformatics repository with more and newer packages

Explore Python projects spanning ML models, bioinformatics tools, tkinter GUIs, and data analysis utilities. These projects showcase Python’s versatility in advancing data insights and solving complex challenges in computational biology and software development.

Web scraping tools designed to assemble automated daily/monthly literature reviews

UGENE is free open-source cross-platform bioinformatics software

Conda recipes for the bioconda channel.

Data management of large-scale whole-genome sequence variant calls (Development version only)

Better Alignments with Translated HMMER

Process raw haplotagging data, from raw sequences to phased haplotypes, batteries included.

An easy-to-use Hi-C data processing software supporting distributed computation.

Comprehensive lifecycle tracking algorithms for yeast cells

Predict the whole sequence and 3D structure of masked protein sequences with ESM by @evolutionaryscale

Extension to HCV-GLUE - contains all published HCV data from NCBI, plus analysis logic for HCV genomes.

Integrated Pipeline Reports (IPR) client. The web interface for the reporting application as part of PORI

A collection of various tools useful for the deep analysis of data generated via the CRSSANT/rna2d3d pipeline.