Official git repository for Biopython (originally converted from CVS)
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Updated
Jul 1, 2024 - Python
Official git repository for Biopython (originally converted from CVS)
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
Data intensive science for everyone.
In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more
🧬 Nucleotide Transformer: Building and Evaluating Robust Foundation Models for Human Genomics
Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
tools for genetic genealogy and the analysis of consumer DNA test results
Bioinformatics toolkits for manipulating sequence, alignment, and phylogenetic tree files
Generate input parameters and coordinates for atomistic and coarse-grained simulations of polymers, ssDNA, and carbohydrates
tools for reading, writing, merging, and remapping SNPs
nucleic acid folding
A package for designing compact and comprehensive capture probe sets.
A fast 23andMe genome text file parser, now superseded by arv
Fast and flexible ORF finder
Reference-free variant discovery in large eukaryotic genomes
DNABERT_S: Learning Species-Aware DNA Embedding with Genome Foundation Models
Python package to analyze DNA methylation data
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