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Issues list

fastp should report error and exit when there is no disk space left for output
#9 opened Nov 23, 2017 by joshle
2
Sort overrepresented sequences by count enhancement
#37 opened Mar 10, 2018 by mblue9
1
Stitch together overlapping reads? enhancement
#31 opened Mar 3, 2018 by tseemann
21
Multiple input
#60 opened May 29, 2018 by mossishahi
4
is trimming for PE symmetrical
#158 opened May 24, 2019 by aistBMRG
1
how does fastp deal withoverlapped bases with high quality both on read1 and read2
#157 opened May 9, 2019 by ghost
Is the PHRED algorithm used when trimming or averaging quality scores?
#159 opened May 28, 2019 by edgardomortiz
6
Report polyX trim statistics. enhancement
#145 opened Mar 21, 2019 by bichkd
fastp --help and fastp --version : STDOUT versus STDERR enhancement
#140 opened Mar 12, 2019 by russHyde
2
Only keep reads that contain certain sequence and allow cutting.
#141 opened Mar 13, 2019 by ghuls
-f, --trim_front1 option gives fewer than expected counts
#155 opened May 2, 2019 by sujaikumar
2
Makefile enhancements
#156 opened May 3, 2019 by outpaddling
1
Question: does fastp do quality trimming first or adapter trimming first
#204 opened Oct 31, 2019 by tamuanand
2
More statistics for reads
#202 opened Oct 22, 2019 by smoretti
3
Question: rationale duplication detection
#203 opened Oct 24, 2019 by aistBMRG
1
Option to disable report output
#201 opened Oct 18, 2019 by donutbrew
5
mismatches allowed in adapter trimming
#200 opened Oct 10, 2019 by hrehrauer
2
Adding UMI from third file fails with zero length reads
#207 opened Nov 12, 2019 by dh10
1
No adapter detected for read1
#205 opened Nov 7, 2019 by millerh1
1
Up to 16 threads?
#211 opened Nov 17, 2019 by jianshu93
6
Vastly different read numbers between versions
#174 opened Jul 18, 2019 by jumoline
1
threading does not obey limits
#169 opened Jul 5, 2019 by rbutleriii
3
rRNA or mtRNA sequences are detected as adapter sequences?
#171 opened Jul 16, 2019 by wisense
1
zlib version
#190 opened Aug 30, 2019 by chendongo
3
Request: multiple file in and single file out
#183 opened Aug 12, 2019 by lozybean
4
ProTip! no:milestone will show everything without a milestone.